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Home » whole genome sequencing

Articles Tagged with ''whole genome sequencing''

multicolor 3d rendering of dna

Researchers Use Publicly Available WGS Data to Investigate AMR in Salmonella

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Bailee Henderson
September 12, 2023

A recent study aiming to investigate the usefulness of publicly available whole genome sequencing (WGS) data for Salmonella surveillance has provided an overview of antimicrobial resistance (AMR) among different serovars and defined the most common antibiotic resistance genes.


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chicken hanging out on some equipment

Using WGS, MSU Researchers Find More Than Half of Campylobacter is Resistant to Antibiotics

September 5, 2023

Using whole genome sequencing (WGS), a recent study led by Michigan State University (MSU) has demonstrated widespread antimicrobial resistance (AMR) among foodborne Campylobacter jejuni in the state, and the ability to trace the origins of specific strains.


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prawns on a plate

UK Study Finds Low Presence of Salmonella on Retail Food, but High Genetic Diversity

August 18, 2023

A survey of non-typhoidal Salmonella (NTS) found on retail foods sold in the UK has shown the overall prevalence of Salmonella to be low, although there is great genetic diversity among the Salmonella that was present, which may hinder outbreak investigations and source attribution in the case of foodborne illness outbreaks. 


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digital rendering of dna strands

CFIA’s GeneSeekR Program Identifies Specific Strains of Foodborne E. Coli, Possible Severity of Illness

July 26, 2023

The Canadian Food Inspection Agency (CFIA) recently highlighted a new rapid tool called GeneSeekR that can confirm if Escherichia coli detected in food samples can cause illness in humans.


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Foodborne Listeriosis Causes Three Deaths in Washington State, WGS Suggests Common Source

July 26, 2023

State and local health departments in Washington are investigating five cases of foodborne illness caused by Listeria monocytogenes in Western Washington, three of which have resulted in death. Whole genome sequencing (WGS) has indicated a common source of infection.


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digital rendering of dna

“New Wave” of DNA Sequencing for Food Safety Launched at FAO-Led Training

June 7, 2023

Expert scientists from nine African countries convened recently in Accra, Ghana to launch a new wave of diagnostic testing using DNA sequencing aimed at improving food safety and controlling antimicrobial resistance (AMR). 


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FDA Highlights International Food Safety Collaboration, Work with APEC

May 2, 2023

The U.S. Food and Drug Administration has highlighted the importance of its engagement with international organizations on critical food safety topics, in particular, the Asia Pacific Economic Cooperation (APEC).


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FSA Highlights Work to Improve UK Foodborne Illness Surveillance Under PATH-SAFE Program

March 15, 2023

The UK Food Standards Agency recently highlighted the Pathogen Surveillance in Agriculture, Food and Environment (PATH-SAFE) program, which aims to develop a national surveillance network that uses whole genome sequencing (WGS) to improve the monitoring of foodborne pathogens and antimicrobial resistance (AMR).


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Food Safety Matters

Ep. 140. Dr. Martin Wiedmann: Pathogen Interventions to Advance Food Safety

March 14, 2023

In this episode of Food Safety Matters, we talk with Martin Wiedmann, Ph.D., D.V.M., the Gellert Family Professor in Food Safety and Food Science at Cornell University, about his research on Listeria and Salmonella, his work to strengthen foodborne illness surveillance and response, his use of whole genome sequencing (WGS), and other topics.


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romaine lettuce, whole and chopped on a plate

Using WGS, CDC Identifies Source of Outbreaks of One Persistent E. Coli Strain

March 1, 2023

Using whole genome sequencing (WGS), the U.S. Centers for Disease Control and Prevention were able to link a persistent, drug-resistant strain of Escherichia coli O157:H7 to multiple sources for various foodborne illness outbreaks.


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