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Home » whole genome sequencing

Articles Tagged with ''whole genome sequencing''

DNA WGS

Guidelines for Reporting WGS Data to EFSA One Health System

Bailee Henderson headshot
Bailee Henderson
June 29, 2022

The European Food Safety Commission (EFSA) has published guidelines for reporting whole genome sequencing (WGS) data to its One Health WGS System, which will support outbreak investigations and other EFSA activities.


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global covid spread

Cold Foods Supply Chain May Spread COVID-19, Testing Methods Analyzed

Bailee Henderson headshot
Bailee Henderson
June 10, 2022

A recent study suggests that the cold foods supply chain is the optimal environment for the COVID-19 virus to spread over long distances. The study explores various prevention and testing methods that could be used to mitigate the pathogen’s spread through cold-chain foods.


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roasted pork

Study Finds High AMR Levels in Salmonella in Pork

Bailee Henderson headshot
Bailee Henderson
June 9, 2022

A study that observed non-typhoidal Salmonella in Vietnamese retail pork found high levels of antimicrobial resistance (AMR), multi-drug resistance, and resistance to the antibiotic colistin.


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lab researcher

EFSA Project Explores WGS Standardization

Bailee Henderson headshot
Bailee Henderson
May 27, 2022

A European Food Safety Authority (EFSA) fellowship explores whole genome sequencing (WGS) standardization in outbreak investigations, as well as the use of WGS in monitoring pathogen virulence and antimicrobial resistance.


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FSS 2022 Town Hall

FSS 2022: Regulators Highlight Policy, Technology Advances at Town Hall

ABlume
Adrienne Blume, M.A.
May 13, 2022

During the Thursday morning Town Hall at the 2022 Food Safety Summit, top food safety regulators from FDA, USDA, CDC, and AFDO discussed initiatives and advances in food traceability, food safety policy, recalls, pathogen monitoring, food safety culture, and a number of other timely areas. 


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listeria monocytogenes

Listeria Dataset Constructed With Whole Genome Sequencing

Bailee Henderson headshot
Bailee Henderson
May 12, 2022

A dataset on Listeria monocytogenes has been compiled from over 1,400 genomes collected across 19 European nations to better understand the pathogen’s genetic makeup and adaptation in different ecological niches.


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uncooked salmon

Study Finds High Listeriosis Risk from Uncooked Salmon

Bailee Henderson headshot
Bailee Henderson
May 4, 2022

A recent study reveals that a significant number of listeriosis cases in Germany were caused by the consumption of smoked or graved salmon that was contaminated by Listeria monocytogenes.


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genome

Barriers to WGS Implementation Around the World

Bailee Henderson headshot
Bailee Henderson
April 25, 2022

The majority of the world outside of North America and Europe does not use whole genome sequencing for food safety surveillance, a recent study finds.


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probiotic bacteria

Probiotics May Cause AMR in Cattle, Swine

Bailee Henderson headshot
Bailee Henderson
April 13, 2022

Whole genome sequencing of Enterococcus faecium presents the theoretical possibility of probiotics in swine and cattle production as a source of antimicrobial resistance (AMR). 


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e coli

Study Observes Two Decades of E. coli Evolution

Bailee Henderson headshot
Bailee Henderson
April 11, 2022

The U.S. Department of Agriculture’s Agricultural Research Service (USDA ARS) recently published a study that observed the evolution of certain shiga toxin-producing Escherichia coli (STEC) O157:H7 strains over 23 years.


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